TargetMiner : Prediction of miRNA Targets
miRNA ID: hsa-miR-3649
miRNA Sequence: AGGGACCUGAGUGUCUAAG
| mRNA | Chromosome | 6mer (count) | 6mer (position) | 7mer-A1 (count) | 7mer-A1 (position) | 7mer-m8 (count) | 7mer-m8 (position) | 8mer (count) | 8mer (position) |
| NM_000084 | chrX | 5 | 6245 5938 5805 4440 4319 | - | - | - | - | 1 | 896 |
| NM_000208 | chr19 | 8 | 4344 4267 1558 1530 1282 723 613 35 | 2 | 4436 3349 | 1 | 1295 | - | - |
| NM_000368 | chr9 | 5 | 4683 1820 1070 999 563 | 2 | 4606 1688 | 1 | 131 | - | - |
| NM_000401 | chr11 | 3 | 1054 389 22 | - | - | - | - | 1 | 809 |
| NM_000555 | chrX | 4 | 6586 5929 5891 906 | 1 | 5757 | - | - | 1 | 2188 |
| NM_000633 | chr18 | 4 | 1076 1014 536 39 | - | - | - | - | 1 | 3931 |
| NM_000831 | chr1 | 12 | 6071 6057 5858 5841 5660 4177 4099 2336 1580 1444 1154 705 | 1 | 546 | 3 | 4302 1804 724 | 1 | 4713 |
| NM_000872 | chr10 | 1 | 544 | - | - | 1 | 1137 | 1 | 615 |
| NM_000899 | chr12 | 2 | 1703 419 | 4 | 3104 936 668 271 | - | - | - | - |
| NM_001001669 | chr5 | 2 | 1687 609 | 1 | 1820 | 2 | 917 589 | 1 | 2194 |
| NM_001002909 | chr17 | - | - | - | - | - | - | 2 | 1710 861 |
| NM_001003652 | chr18 | 3 | 8409 2062 72 | - | - | 2 | 6434 2532 | 2 | 3021 127 |
| NM_001003794 | chr3 | 3 | 2437 1208 711 | 2 | 2923 323 | 1 | 2573 | 1 | 233 |
| NM_001003800 | chr9 | 4 | 3207 1354 800 343 | - | - | 1 | 1043 | 1 | 443 |
| NM_001004304 | chr12 | 2 | 2411 2091 | 3 | 1111 968 77 | - | - | 1 | 1226 |
| NM_001008408 | chr7 | 7 | 5803 5776 4856 4302 2183 1757 1499 | - | - | 3 | 1778 1087 98 | - | - |
| NM_001010867 | chr1 | 7 | 6617 6228 6053 5739 4103 1434 387 | 2 | 2196 269 | 1 | 1906 | 1 | 2077 |
| NM_001011666 | chr7 | 3 | 2016 1530 1471 | 1 | 1556 | - | - | 1 | 5189 |
| NM_001018067 | chr1 | 2 | 696 28 | - | - | - | - | 1 | 979 |
| NM_001018068 | chr1 | 2 | 696 28 | - | - | - | - | 1 | 979 |
| NM_001018069 | chr1 | 2 | 696 28 | - | - | - | - | 1 | 979 |
| NM_001025580 | chrX | 3 | 1431 664 448 | - | - | - | - | 1 | 3405 |
| NM_001031680 | chr1 | 6 | 2066 953 711 541 463 115 | 5 | 2037 840 676 133 122 | 2 | 2254 820 | 1 | 887 |
| NM_001038707 | chr1 | 4 | 1923 1460 679 277 | 1 | 1796 | - | - | 1 | 1621 |
| NM_001038707 | chr1 | 4 | 1923 1460 679 277 | 1 | 1796 | - | - | 1 | 1621 |
| NM_001039547 | chr3 | 3 | 5869 3034 288 | 3 | 5836 5642 2829 | - | - | 1 | 1264 |
| NM_001039690 | chr16 | 7 | 1531 847 587 488 446 103 83 | 2 | 954 525 | 1 | 503 | 2 | 1923 462 |
| NM_001039840 | chrX | 3 | 4315 3724 80 | - | - | - | - | 1 | 4777 |
| NM_001040144 | chr16 | 7 | 1531 847 587 488 446 103 83 | 2 | 954 525 | 1 | 503 | 2 | 1923 462 |
| NM_001040146 | chr16 | 7 | 1531 847 587 488 446 103 83 | 2 | 954 525 | 1 | 503 | 2 | 1923 462 |
| NM_001042601 | chr3 | 3 | 2428 2216 696 | - | - | 1 | 2921 | 1 | 2615 |
| NM_001042603 | chr12 | - | - | 1 | 1475 | 2 | 4368 3885 | 1 | 2060 |
| NM_001083621 | chr1 | 4 | 2980 1569 773 556 | 2 | 3732 531 | 3 | 3502 3368 1136 | 1 | 1408 |
| NM_001100108 | chr1 | 6 | 6985 5192 2697 2194 901 791 | 2 | 7029 1072 | 3 | 8036 7076 6740 | - | - |
| NM_001204 | chr2 | 4 | 3073 2668 2243 919 | 1 | 287 | - | - | 1 | 7035 |
| NM_001695 | chr8 | 5 | 3751 3089 2894 2612 210 | - | - | 2 | 767 277 | 1 | 3067 |
| NM_001699 | chr19 | 7 | 1601 1574 1566 1438 1181 384 302 | - | - | 1 | 150 | - | - |
| NM_001759 | chr12 | 4 | 5214 3656 1643 48 | 1 | 3450 | - | - | 1 | 164 |
| NM_001987 | chr12 | 3 | 1221 638 527 | 1 | 2878 | 1 | 499 | 1 | 1514 |
| NM_002737 | chr17 | 8 | 5879 4772 2374 2264 1650 1369 1116 167 | 1 | 4240 | 3 | 5887 4120 2069 | - | - |
| NM_002886 | chr3 | 6 | 4173 4087 3406 3310 579 189 | 1 | 4186 | - | - | 1 | 4925 |
| NM_003042 | chr3 | 1 | 2269 | 1 | 1707 | - | - | 2 | 1536 819 |
| NM_003161 | chr17 | 2 | 3127 1185 | - | - | - | - | 1 | 2202 |
| NM_003234 | chr3 | 6 | 2056 2047 1893 580 544 346 | - | - | 2 | 1693 558 | - | - |
| NM_003262 | chr3 | 4 | 5089 4502 3306 149 | - | - | - | - | 2 | 4108 241 |
| NM_003392 | chr3 | 5 | 3859 3047 1101 929 478 | - | - | - | - | 1 | 390 |
| NM_003713 | chr1 | 1 | 1130 | - | - | - | - | 2 | 1673 1214 |
| NM_003994 | chr12 | 2 | 1703 419 | 4 | 3104 936 668 271 | - | - | - | - |
| NM_004112 | chr17 | 2 | 1750 238 | - | - | 3 | 1239 1221 26 | 1 | 121 |
| NM_004171 | chr11 | 8 | 9508 9008 8636 3804 3701 3067 2156 921 | - | - | 1 | 6182 | 1 | 8857 |
| NM_004185 | chr1 | 2 | 720 163 | - | - | - | - | 1 | 546 |
| NM_004350 | chr1 | 6 | 2066 953 711 541 463 115 | 5 | 2037 840 676 133 122 | 2 | 2254 820 | 1 | 887 |
| NM_004904 | chr7 | 3 | 2016 1530 1471 | 1 | 1556 | - | - | 1 | 5189 |
| NM_004956 | chr7 | 4 | 3013 3007 2881 814 | 1 | 292 | - | - | 1 | 3281 |
| NM_004992 | chrX | 10 | 8372 7086 7072 6128 5988 5803 2839 1787 1482 1152 | - | - | 1 | 5208 | 1 | 5797 |
| NM_004992 | chrX | 10 | 8372 7086 7072 6128 5988 5803 2839 1787 1482 1152 | - | - | 1 | 5208 | 1 | 5797 |
| NM_005006 | chr2 | 1 | 339 | - | - | - | - | 1 | 907 |
| NM_005188 | chr11 | 4 | 5656 5574 1964 1527 | 5 | 7428 6278 5625 3313 142 | - | - | 1 | 1398 |
| NM_005197 | chr14 | - | - | - | - | - | - | 2 | 4584 3951 |
| NM_005477 | chr15 | 3 | 2374 2211 290 | 2 | 2010 812 | 1 | 2168 | 2 | 1850 256 |
| NM_005477 | chr15 | 3 | 2374 2211 290 | 2 | 2010 812 | 1 | 2168 | 2 | 1850 256 |
| NM_005840 | chrX | 6 | 7355 6980 6813 6423 5198 2840 | - | - | 1 | 5543 | 1 | 4899 |
| NM_005901 | chr18 | 3 | 8409 2062 72 | - | - | 2 | 6434 2532 | 2 | 3021 127 |
| NM_005955 | chr1 | 6 | 5345 4264 3970 3923 2057 1940 | 1 | 1007 | - | - | 1 | 1014 |
| NM_006237 | chr13 | 1 | 888 | - | - | 1 | 2290 | 1 | 1792 |
| NM_006251 | chr5 | 3 | 2243 709 557 | - | - | - | - | 1 | 248 |
| NM_006599 | chr16 | 2 | 5288 1230 | 1 | 62 | - | - | 1 | 5107 |
| NM_006609 | chr2 | 2 | 2335 1910 | - | - | - | - | 1 | 2074 |
| NM_006614 | chr3 | 1 | 3528 | 1 | 2685 | - | - | 1 | 1052 |
| NM_006729 | chrX | 4 | 3652 2215 1798 1245 | - | - | - | - | 2 | 5054 3972 |
| NM_007011 | chr15 | 8 | 6317 4227 2732 1738 1732 1698 1037 837 | 2 | 5972 1833 | 2 | 641 74 | - | - |
| NM_007050 | chr20 | 8 | 7354 6485 3177 2654 2490 2214 1091 173 | 1 | 1474 | 2 | 7686 6160 | - | - |
| NM_007195 | chr18 | 5 | 3592 1380 1259 1147 21 | 2 | 1395 1046 | 1 | 2986 | - | - |
| NM_007238 | chr20 | 6 | 3670 3189 1293 1168 1109 119 | 3 | 689 674 220 | 1 | 312 | - | - |
| NM_007249 | chr13 | 7 | 8796 7742 6613 6306 2239 1393 733 | 1 | 1122 | 2 | 7296 1731 | 3 | 8834 2057 524 |
| NM_007283 | chr3 | 3 | 2437 1208 711 | 2 | 2923 323 | 1 | 2573 | 1 | 233 |
| NM_012104 | chr11 | 1 | 3357 | 1 | 173 | - | - | 2 | 3034 2816 |
| NM_012104 | chr11 | 1 | 3357 | 1 | 173 | - | - | 2 | 3034 2816 |
| NM_012214 | chr2 | 5 | 6338 2561 2165 2157 357 | 1 | 1207 | - | - | 1 | 1701 |
| NM_012262 | chr1 | 3 | 3531 317 282 | 1 | 3643 | - | - | 1 | 1220 |
| NM_012287 | chr3 | 2 | 3695 1448 | - | - | - | - | 1 | 1787 |
| NM_012316 | chr1 | 6 | 4298 3461 2106 1308 971 408 | 1 | 1208 | 2 | 3802 695 | - | - |
| NM_012479 | chr7 | 5 | 2629 1058 873 783 717 | 1 | 361 | - | - | 1 | 510 |
| NM_014155 | chr11 | 3 | 6037 1029 153 | - | - | 1 | 112 | 1 | 1443 |
| NM_014730 | chr12 | 6 | 3588 2027 1961 1481 1350 685 | 4 | 3706 1835 591 186 | 1 | 4444 | - | - |
| NM_014730 | chr12 | 6 | 3588 2027 1961 1481 1350 685 | 4 | 3706 1835 591 186 | 1 | 4444 | - | - |
| NM_014747 | chr1 | 11 | 5691 4997 4691 3644 1680 1119 971 759 744 440 387 | 3 | 4707 3700 752 | - | - | - | - |
| NM_014787 | chr1 | 3 | 2535 2244 2090 | - | - | - | - | 1 | 1094 |
| NM_014810 | chr1 | 2 | 3448 2825 | - | - | 2 | 2944 1483 | 1 | 273 |
| NM_014828 | chr14 | 2 | 688 413 | 1 | 2214 | - | - | 1 | 627 |
| NM_014870 | chr1 | 4 | 2980 1569 773 556 | 2 | 3732 531 | 3 | 3502 3368 1136 | 1 | 1408 |
| NM_014877 | chr17 | 9 | 7403 7239 7021 6835 6545 6119 5256 2780 1760 | 1 | 7660 | 2 | 5543 4960 | - | - |
| NM_015033 | chr9 | 7 | 3117 1298 721 537 414 392 130 | 2 | 1172 1052 | 1 | 2960 | 1 | 3235 |
| NM_015035 | chr20 | 8 | 6128 5933 5762 5742 4517 4064 1722 1213 | 2 | 6363 1888 | 1 | 6568 | - | - |
| NM_015094 | chr22 | 11 | 3309 3247 3143 3076 1458 968 960 822 305 289 99 | 2 | 3194 204 | 1 | 3932 | - | - |
| NM_015199 | chr3 | 3 | 2168 2030 919 | - | - | - | - | 1 | 1154 |
| NM_015205 | chr13 | 6 | 4945 4440 4098 1468 762 132 | 1 | 210 | 3 | 4593 1895 178 | - | - |
| NM_015326 | chr1 | 6 | 2334 1006 934 862 605 104 | 1 | 2677 | 2 | 1949 1153 | - | - |
| NM_015332 | chr7 | 6 | 3394 2781 2676 2304 664 651 | - | - | 2 | 1380 1170 | 1 | 2506 |
| NM_015365 | chrX | 3 | 1431 664 448 | - | - | - | - | 1 | 3405 |
| NM_015564 | chr5 | - | - | - | - | 1 | 301 | 1 | 688 |
| NM_015640 | chr1 | 2 | 696 28 | - | - | - | - | 1 | 979 |
| NM_015879 | chr18 | 6 | 7850 7792 6932 5612 743 613 | 1 | 1715 | 1 | 6383 | 1 | 6376 |
| NM_015906 | chr1 | 5 | 4504 4052 3307 3257 1126 | - | - | - | - | - | - |
| NM_015995 | chr15 | 9 | 5283 5127 4746 3878 3525 3466 2065 1381 344 | 1 | 5182 | 1 | 2218 | 1 | 4270 |
| NM_016257 | chr1 | 3 | 3360 433 22 | 2 | 622 365 | 2 | 2879 196 | 1 | 3049 |
| NM_016577 | chr3 | 5 | 4299 4027 3362 1245 644 | - | - | - | - | 1 | 2807 |
| NM_017590 | chr22 | 7 | 2602 2537 973 851 828 385 358 | 2 | 877 755 | 1 | 664 | - | - |
| NM_017628 | chr4 | 1 | 3869 | - | - | 1 | 3927 | 2 | 4306 3955 |
| NM_017633 | chr6 | 1 | 278 | - | - | 1 | 2565 | 1 | 423 |
| NM_017738 | chr9 | 3 | 943 814 113 | - | - | - | - | 1 | 1066 |
| NM_017813 | chr8 | 7 | 5377 4652 4109 3814 2157 802 587 | - | - | - | - | - | - |
| NM_017848 | chrX | 1 | 2903 | - | - | - | - | 3 | 3010 337 236 |
| NM_018223 | chr12 | 1 | 120 | - | - | - | - | 3 | 874 811 748 |
| NM_018440 | chr8 | 5 | 8152 5766 3366 2024 971 | 1 | 290 | - | - | 1 | 6683 |
| NM_018999 | chr10 | 3 | 4332 1222 1074 | - | - | 1 | 4788 | 2 | 1619 822 |
| NM_020228 | chr11 | 7 | 2416 1975 1726 1635 1628 651 444 | - | - | - | - | - | - |
| NM_020239 | chr1 | 4 | 1923 1460 679 277 | 1 | 1796 | - | - | 1 | 1621 |
| NM_020718 | chr16 | 3 | 6141 1409 275 | 1 | 4983 | 1 | 1341 | 1 | 766 |
| NM_021090 | chr22 | 5 | 4404 4323 1197 900 880 | 1 | 952 | - | - | 1 | 1053 |
| NM_021116 | chr7 | 12 | 7821 7686 5862 3133 2408 2282 2080 1906 1434 1241 1193 696 | 1 | 6989 | 1 | 3288 | 2 | 5958 2158 |
| NM_021913 | chr19 | 7 | 1601 1574 1566 1438 1181 384 302 | - | - | 1 | 150 | - | - |
| NM_022048 | chr15 | 7 | 5962 4280 1834 1687 1558 1452 884 | - | - | 2 | 4840 579 | 2 | 5081 218 |
| NM_022166 | chr16 | 5 | 4376 767 461 376 115 | 1 | 4304 | 2 | 431 267 | 1 | 1388 |
| NM_022459 | chr13 | 2 | 6284 2015 | 3 | 5712 4975 3859 | - | - | 1 | 5569 |
| NM_022462 | chr19 | 7 | 3544 2723 2457 1098 688 372 226 | 3 | 1521 1456 199 | - | - | - | - |
| NM_022719 | chr22 | 3 | 3020 2377 559 | - | - | 2 | 2393 536 | 2 | 2560 1088 |
| NM_022842 | chr3 | 5 | 2907 2365 1052 454 402 | - | - | 1 | 385 | 1 | 2944 |
| NM_024494 | chr1 | 2 | 720 163 | - | - | - | - | 1 | 546 |
| NM_024949 | chr4 | 1 | 4388 | 1 | 3651 | 1 | 3328 | 1 | 3310 |
| NM_024963 | chr7 | 6 | 5751 5410 4154 3745 1939 769 | 5 | 5177 4755 4543 2189 28 | 3 | 2361 1872 638 | - | - |
| NM_024989 | chr2 | 5 | 7450 7417 6838 3220 726 | 1 | 2393 | 1 | 1558 | - | - |
| NM_030576 | chr17 | 1 | 2661 | 1 | 352 | - | - | 2 | 2350 1785 |
| NM_030806 | chr1 | 10 | 9376 9183 8833 8519 6974 6476 6208 5710 3362 2391 | 2 | 7482 3392 | 4 | 8243 7056 5700 3155 | - | - |
| NM_030940 | chr9 | 2 | 1122 1058 | - | - | 1 | 214 | 1 | 31 |
| NM_033020 | chr1 | 5 | 4504 4052 3307 3257 1126 | - | - | - | - | - | - |
| NM_053043 | chr7 | 7 | 5803 5776 4856 4302 2183 1757 1499 | - | - | 3 | 1778 1087 98 | - | - |
| NM_133170 | chr20 | 8 | 7354 6485 3177 2654 2490 2214 1091 173 | 1 | 1474 | 2 | 7686 6160 | - | - |
| NM_133334 | chr4 | 7 | 6217 5391 4927 4630 4495 1208 1093 | 2 | 6238 3967 | 2 | 5600 2291 | - | - |
| NM_133445 | chr9 | 8 | 3769 3136 2782 1366 1138 598 115 109 | - | - | 1 | 189 | - | - |
| NM_138288 | chr14 | - | - | 1 | 1442 | 1 | 28 | 1 | 1591 |
| NM_138444 | chr13 | 2 | 4115 3348 | 1 | 470 | 1 | 860 | 1 | 695 |
| NM_138713 | chr16 | 2 | 5288 1230 | 1 | 62 | - | - | 1 | 5107 |
| NM_138714 | chr16 | 2 | 5288 1230 | 1 | 62 | - | - | 1 | 5107 |
| NM_138971 | chr11 | 1 | 3357 | 1 | 173 | - | - | 2 | 3034 2816 |
| NM_138971 | chr11 | 1 | 3357 | 1 | 173 | - | - | 2 | 3034 2816 |
| NM_138972 | chr11 | 1 | 3357 | 1 | 173 | - | - | 2 | 3034 2816 |
| NM_138972 | chr11 | 1 | 3357 | 1 | 173 | - | - | 2 | 3034 2816 |
| NM_138973 | chr11 | 1 | 3357 | 1 | 173 | - | - | 2 | 3034 2816 |
| NM_138973 | chr11 | 1 | 3357 | 1 | 173 | - | - | 2 | 3034 2816 |
| NM_144571 | chr4 | 3 | 6698 6171 5370 | - | - | - | - | 1 | 4837 |
| NM_144632 | chr2 | 2 | 1737 1508 | - | - | 1 | 247 | 1 | 162 |
| NM_145176 | chr6 | 5 | 3385 3213 1359 1138 516 | - | - | - | - | 1 | 203 |
| NM_152280 | chr1 | 5 | 2608 883 875 440 319 | - | - | 2 | 3396 3248 | - | - |
| NM_152624 | chr5 | 9 | 5980 5772 5650 5563 5546 4813 4499 2529 1719 | 2 | 1746 1408 | - | - | 1 | 928 |
| NM_152924 | chr15 | 8 | 6317 4227 2732 1738 1732 1698 1037 837 | 2 | 5972 1833 | 2 | 641 74 | - | - |
| NM_153050 | chr22 | 5 | 4404 4323 1197 900 880 | 1 | 952 | - | - | 1 | 1053 |
| NM_153051 | chr22 | 5 | 4404 4323 1197 900 880 | 1 | 952 | - | - | 1 | 1053 |
| NM_153207 | chr12 | 2 | 3900 3028 | 2 | 2988 1591 | 1 | 2639 | 1 | 1608 |
| NM_153255 | chr6 | 1 | 797 | - | - | - | - | 1 | 828 |
| NM_172071 | chr1 | 3 | 7458 5823 5698 | 1 | 2817 | - | - | 1 | 6211 |
| NM_173214 | chr16 | 2 | 5288 1230 | 1 | 62 | - | - | 1 | 5107 |
| NM_173511 | chr2 | 3 | 2875 2813 1495 | - | - | - | - | 1 | 239 |
| NM_175907 | chr18 | 4 | 2844 486 371 259 | 1 | 2534 | 1 | 139 | - | - |
| NM_177414 | chr1 | 1 | 1130 | - | - | - | - | 2 | 1673 1214 |
| NM_178151 | chrX | 4 | 6586 5929 5891 906 | 1 | 5757 | - | - | 1 | 2188 |
| NM_178152 | chrX | 4 | 6586 5929 5891 906 | 1 | 5757 | - | - | 1 | 2188 |
| NM_178153 | chrX | 4 | 6586 5929 5891 906 | 1 | 5757 | - | - | 1 | 2188 |
| NM_181521 | chr16 | 7 | 5656 4802 4511 1785 247 236 164 | 3 | 6660 6228 4611 | - | - | - | - |
| NM_181809 | chr1 | 4 | 3617 3300 639 148 | - | - | 3 | 3725 2894 1405 | 1 | 3100 |
| NM_182898 | chr7 | 3 | 2016 1530 1471 | 1 | 1556 | - | - | 1 | 5189 |
| NM_182899 | chr7 | 3 | 2016 1530 1471 | 1 | 1556 | - | - | 1 | 5189 |
| NM_183397 | chr20 | 6 | 3894 3413 1517 1392 1333 343 | 3 | 913 898 444 | 1 | 536 | - | - |
| NM_194286 | chr12 | 5 | 6157 5819 5243 835 494 | 3 | 4408 1503 565 | - | - | 1 | 4211 |
| NM_194313 | chr9 | 2 | 1709 116 | - | - | 1 | 83 | 2 | 1752 164 |
| NM_199437 | chr11 | 7 | 2416 1975 1726 1635 1628 651 444 | - | - | - | - | - | - |
| NM_199438 | chr11 | 7 | 2416 1975 1726 1635 1628 651 444 | - | - | - | - | - | - |
| NM_199439 | chr11 | 7 | 2416 1975 1726 1635 1628 651 444 | - | - | - | - | - | - |
| NM_206907 | chr5 | 3 | 2243 709 557 | - | - | - | - | 1 | 248 |
| NM_207122 | chr11 | 3 | 1054 389 22 | - | - | - | - | 1 | 809 |