TargetMiner : Prediction of miRNA Targets
miRNA ID: hsa-miR-339-5p
miRNA Sequence: UCCCUGUCCUCCAGGAGCUCACG
| mRNA | Chromosome | 6mer (count) | 6mer (position) | 7mer-A1 (count) | 7mer-A1 (position) | 7mer-m8 (count) | 7mer-m8 (position) | 8mer (count) | 8mer (position) |
| NM_000332 | chr6 | 7 | 6871 5016 4660 1382 375 367 268 | 1 | 4923 | - | - | 1 | 781 |
| NM_000337 | chr5 | 8 | 5932 5133 4257 2232 2222 2120 2085 1740 | - | - | 1 | 1363 | - | - |
| NM_000599 | chr2 | 10 | 3521 3422 3385 3328 3055 3020 1823 1069 923 369 | - | - | 4 | 3793 3587 3005 396 | 1 | 3267 |
| NM_001007278 | chr13 | 5 | 3465 2031 1875 1687 1004 | 1 | 5067 | 2 | 1035 552 | - | - |
| NM_001013839 | chr17 | 6 | 2263 1887 1865 795 550 334 | 1 | 1789 | 3 | 1928 1781 409 | 2 | 2486 744 |
| NM_001018050 | chr22 | 9 | 3409 3286 3145 3097 2266 1312 979 867 388 | 2 | 2675 2626 | 3 | 2860 884 483 | 1 | 2298 |
| NM_001031695 | chr22 | 7 | 4852 3995 3737 3484 1172 554 509 | 1 | 3425 | - | - | 3 | 4950 4297 2169 |
| NM_001037553 | chr21 | 7 | 4987 4628 4419 3891 1709 873 197 | - | - | 1 | 1857 | 1 | 4719 |
| NM_001167 | chrX | 8 | 6197 6064 4405 4204 1995 1094 818 347 | 1 | 6234 | 4 | 5667 4692 2042 996 | - | - |
| NM_001204 | chr2 | 7 | 7303 7030 6707 5008 4771 564 386 | - | - | - | - | - | - |
| NM_001420 | chr19 | 8 | 2837 2636 2540 1119 781 757 709 151 | 2 | 823 183 | 1 | 2898 | 2 | 2546 909 |
| NM_001759 | chr12 | 7 | 4775 4475 4132 4077 2120 1560 1499 | - | - | 2 | 4139 4106 | - | - |
| NM_003298 | chr3 | 6 | 5032 4537 3933 2100 1733 1135 | - | - | 3 | 4339 3907 472 | 1 | 4216 |
| NM_003320 | chr11 | 7 | 3871 1725 1129 788 597 586 365 | 1 | 1094 | 3 | 3409 1079 182 | - | - |
| NM_003458 | chr3 | 9 | 3513 3500 3400 2586 1555 1068 563 286 160 | 1 | 1043 | - | - | 1 | 2848 |
| NM_004463 | chrX | 2 | 566 552 | - | - | 1 | 540 | 1 | 559 |
| NM_004774 | chr17 | 7 | 2907 2329 2106 828 186 91 27 | 1 | 2268 | - | - | - | - |
| NM_004852 | chr18 | 8 | 14308 12966 12724 12084 11133 3165 2829 2512 | 2 | 13172 1812 | 2 | 12680 2416 | - | - |
| NM_005188 | chr11 | 7 | 7740 7302 6754 6669 5367 5246 77 | 1 | 6344 | 1 | 5037 | 2 | 5268 446 |
| NM_005596 | chr9 | 6 | 4698 4434 2551 2411 1206 1158 | 2 | 5475 4544 | 1 | 2031 | - | - |
| NM_006252 | chr1 | 9 | 6738 6671 5754 5009 2684 2433 1904 1472 1289 | - | - | 1 | 1130 | 2 | 5936 1136 |
| NM_006306 | chrX | 7 | 5366 5139 4899 4836 3836 1243 235 | - | - | - | - | 1 | 195 |
| NM_006546 | chr17 | 7 | 5326 5049 4171 2622 2062 846 72 | - | - | 2 | 2597 1065 | 2 | 4964 4685 |
| NM_006690 | chr20 | 5 | 2119 2087 1695 1681 102 | - | - | 2 | 2238 632 | 4 | 1701 1565 282 168 |
| NM_012104 | chr11 | 8 | 3709 3375 3188 2907 2572 2551 982 913 | - | - | - | - | 2 | 618 491 |
| NM_012199 | chr1 | 4 | 3988 1585 1041 162 | - | - | 1 | 3085 | 2 | 4090 3979 |
| NM_014368 | chr9 | 2 | 866 601 | - | - | 1 | 1574 | 2 | 1395 650 |
| NM_014730 | chr12 | 6 | 4440 4410 4277 3924 3197 25 | 2 | 864 370 | 1 | 3700 | 2 | 4742 1014 |
| NM_014766 | chr7 | 4 | 2938 1479 451 341 | 2 | 3253 2671 | 1 | 1530 | 1 | 3675 |
| NM_014772 | chr18 | 11 | 3500 3366 2573 2249 1310 1029 520 434 120 68 55 | - | - | 2 | 1298 81 | 1 | 154 |
| NM_014830 | chr12 | 7 | 3375 1043 715 489 480 333 230 | 2 | 521 25 | 2 | 3574 1309 | 1 | 811 |
| NM_014876 | chr22 | 4 | 1584 1496 1454 1447 | 2 | 2085 1789 | 1 | 1459 | - | - |
| NM_014909 | chr14 | 6 | 3800 3581 3552 3237 2446 513 | - | - | 5 | 3669 2913 2490 1057 104 | 2 | 2852 1077 |
| NM_015090 | chr1 | 9 | 5496 5478 4102 2297 2056 1457 1432 528 490 | 2 | 6118 4151 | 2 | 4633 2044 | 1 | 684 |
| NM_015455 | chr5 | 5 | 3910 3704 2944 1122 62 | - | - | 3 | 3918 3875 1594 | 1 | 210 |
| NM_015995 | chr15 | 11 | 4784 4689 4463 4026 4002 3875 3632 1854 1356 970 574 | 1 | 1152 | 2 | 3921 781 | 1 | 2025 |
| NM_018667 | chr16 | 5 | 2423 889 765 686 560 | 2 | 2037 827 | 2 | 2060 728 | 2 | 111 105 |
| NM_021090 | chr22 | 10 | 4785 4302 4107 4024 3406 1774 1684 1091 665 50 | 2 | 932 404 | 3 | 4873 4331 1426 | - | - |
| NM_030648 | chr4 | 5 | 4464 4034 1970 707 327 | 2 | 5126 320 | 1 | 1890 | - | - |
| NM_030918 | chr1 | 5 | 5150 4659 4649 1048 212 | 4 | 3763 2144 1592 1387 | 2 | 2016 1846 | - | - |
| NM_031908 | chr5 | 3 | 1250 1013 859 | 1 | 1071 | - | - | 2 | 400 29 |
| NM_032829 | chr12 | 6 | 989 833 123 84 68 55 | - | - | 4 | 402 341 172 36 | 2 | 981 287 |
| NM_153487 | chr6 | 10 | 4368 3731 3257 3112 1747 1667 1376 1023 1008 722 | 1 | 3606 | 2 | 298 103 | 1 | 514 |
| NM_175736 | chr12 | 12 | 7036 6734 5819 5803 5733 2279 2217 2171 2036 2009 1249 293 | - | - | 1 | 717 | - | - |