Research
Plan
This document contains the research problems, to do list on monthly basis.
1.
Phylogenetic network reconstruction algorithm.
Duration: 4 months
15-05-2005 to 15-09-2005
Approach: - Algorithmic, if possible try for data mining approaches
15-05-2005 to 15-06-2005. Read papers on phylo. Nets. and overlapping clusters.
15-06-2005 to 30-06-2005. Improvements over previous algorithms and the feasibility study of the new approach.
01-07-2005 to 01-08-2005. Implement the new algorithm.
01-08-2005 to 15-08-2005. Comparisons with different methods
15-08-2005 to 15-09-2005. Write paper.
2.
Phylogenetic supertree constructions methods.
Duration: 3 months
01-10-2005 To 31-12-2005.
Approach: - data mining particularly clustering.
01-10-2005 to 30-10-2005. Read papers and suitable data mining concepts.
01-11-2005 to 30-11-2005. Implement the algorithm and compare with other existing algorithms.
01-12-2005 to 31-12-2005. Analyze the results and write paper.
3.
Phylogenetic supertree for ancestral time divergence.
Duration: 3 moths
01-01-2006 to 31-03-2006.
Approach: - data mining particularly clustering.
01-01-2006 to 31-03-2006. Read papers and relevant data mining approach.
01-02-2006 to 28-02-2006. Implement the algorithm and compare with existing methods.
01-03-2006 to 31-03-2006. Analyze the results and write paper.
4.
Phylogenetic supertrees for semi-labeled taxa.
Duration: 3 months
01-04-2006 to 30-06-2006.
Approach: - data mining particularly clustering.
01-04-2006 to 30-04-2006. Read relevant papers and books.
01-05-2006 to 31-05-2006. Implement the algorithm and compare with existing methods.
01-06-2006 to 30-06-2006. Analyze the results and write paper.
01-07-2006 to 30-11-2006. Writing thesis.
01-12-2006 to 30-12-2006. Submission.