SiFS: Significance and Functional Similarity for Identification of Disease Genes


Software:

  1. Executable Code of SiFS

  2. The source code of the SiFS algorithm is written in C language and compiled in Ubuntu 12.04 LTS 64-bit OS. Download the compressed executable code (e.g. sifs.gz) from the corresponding link and then follow the instructions from terminal/console:

    $gunzip sifs.gz
    $chmod 777 sifs
    $./sifs -h

  3. Example Microarray Data, PPI Network, and Related Files

Supplementary Results:

  1. More Results of SiFS on Several Microarray Data Sets

  2. Curves for AUC and AUPR on Several Microarray Data Sets




Publication:

  1. P. Maji and E. Shah, Significance and Functional Similarity for Identification of Disease Genes, IEEE/ACM Transactions on Computational Biology and Bioinformatics, pp.1--14, 2016.












BIBL
BIBL Members
Publications
Research
Projects
Software
Alumni
BIBL Info
Contact